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ECCCO-mission · Feb 29, 2024 · addd44b · addd44b
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diff --git a/README.md b/README.md
@@ -1,3 +1,16 @@
 # overlappogram
 
 [![CI](https://github.com/jmbhughes/overlappogram/actions/workflows/CI.yml/badge.svg)](https://github.com/jmbhughes/overlappogram/actions/workflows/CI.yml)
+
+![overlappogram example](overlappogram.png)
+
+Overlappogram is a Python package for inverting overlappogram observations of the Sun, for examples MaGIXS observations
+or ECCCO observations.
+
+## How to Use
+
+## Getting Help
+
+## Cite
+
+## Code of Conduct
diff --git a/example_config.toml b/example_config.toml
@@ -0,0 +1,18 @@
+[paths]
+response = "data/D27Feb2024_eccco_response_feldman_m_el_with_tables_trim_sw_lw_s_i_scaled.fits"
+weights = "data/combined_ECCCO_weights_trim_sw_lw_s_i_scaled.fits"
+# image = "data/combined_ECCCO_trim_sw_lw_s_i_scaled.fits"
+output = "output/"
+
+[inversion]
+solution_fov_width = 2
+detector_row_range = [0, 792]
+field_angle_range = [-1227, 1227]
+response_dependency_name = "logt"
+response_dependency_list = [5.7, 5.8, 5.9, 6.0 , 6.1, 6.2, 6.3, 6.4, 6.5, 6.6, 6.7, 6.8]
+smooth_over = 'dependence'
+alphas = [0.2, 0.1, 0.01, 0.005]
+rhos = [0.1]
+
+[execution]
+num_threads = 11
diff --git a/ECCCO_multiion_inversion.py → ...iment_scripts/ECCCO_multiion_inversion.py b/ECCCO_multiion_inversion.py → ...iment_scripts/ECCCO_multiion_inversion.py
diff --git a/compare_spectrally_pure.ipynb → ...ent_scripts/compare_spectrally_pure.ipynb b/compare_spectrally_pure.ipynb → ...ent_scripts/compare_spectrally_pure.ipynb
diff --git a/inspect_results.ipynb → experiment_scripts/inspect_results.ipynb b/inspect_results.ipynb → experiment_scripts/inspect_results.ipynb
diff --git a/photons.ipynb → experiment_scripts/photons.ipynb b/photons.ipynb → experiment_scripts/photons.ipynb
diff --git a/response_normalize.ipynb → experiment_scripts/response_normalize.ipynb b/response_normalize.ipynb → experiment_scripts/response_normalize.ipynb
diff --git a/run_multiion_inversion_parallel.py → ...cripts/run_multiion_inversion_parallel.py b/run_multiion_inversion_parallel.py → ...cripts/run_multiion_inversion_parallel.py
diff --git a/search.py → experiment_scripts/search.py b/search.py → experiment_scripts/search.py
diff --git a/overlappogram.png b/overlappogram.png
diff --git a/run_multiion_inversion.py b/run_multiion_inversion.py
@@ -1,9 +1,9 @@
 import os
 
-nthreads = 1
-os.environ["OMP_NUM_THREADS"] = str(nthreads)
-os.environ["OPENBLAS_NUM_THREADS"] = str(nthreads)
-os.environ["MKL_NUM_THREADS"] = str(nthreads)
+NUMPY_TREAD_COUNT = 1
+os.environ["OMP_NUM_THREADS"] = str(NUMPY_TREAD_COUNT)
+os.environ["OPENBLAS_NUM_THREADS"] = str(NUMPY_TREAD_COUNT)
+os.environ["MKL_NUM_THREADS"] = str(NUMPY_TREAD_COUNT)
 
 import argparse
 import os