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Know2BIO
Know2BIO PublicForked from Yijia-Xiao/Know2BIO
Know2BIO: A Comprehensive Dual-View Benchmark for Evolving Biomedical Knowledge Graphs
Python
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BE298FinalProject
BE298FinalProject PublicFall 2022 Bioengineering 298 Final Project: using protein networks to understand drug and disease mechanisms
Jupyter Notebook
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caseolap_lift
caseolap_lift PublicForked from CaseOLAP/caseolap_lift
Fall 2022 Project collaborating with Alexander Pelletier et al. to improve CaseOLAP's input data quantity, result quality, and usability.
Python
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gene_to_anatomy_text_mining
gene_to_anatomy_text_mining PublicUses PubTator3 to identify genes in PubMed articles. Uses PubMed API and MeSH annotations to identify articles studying anatomies. Uses co-occurrence of gene mentions and anatomy topics to calculat…
Python
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knowledge_graph_of_text_mined_pubmed
knowledge_graph_of_text_mined_pubmed Publicknowledge_graph_of_text_mined_pubmed
Python
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