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v0.12.3

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@garrettwrong garrettwrong released this 01 Jul 12:12
· 433 commits to main since this release

ASPIRE v0.12.3 is patch release adding several fixes and updates.

This release provides the following features:

  • Symmetry boosting for MeanEstimator
  • SymmetryGroup parsing
  • MeanEstimator checkpointing
  • Double precision RelionSource
  • Codify default 3D basis for Estimator (FFB3D).

Bug fixes:

  • Update Projection-Backprojection conventions
  • J-Sync index bug
  • Circular import fix
  • CLOrient3D Lazy Eval
  • evaluate_src_filters_on_grid initializer
  • IndexedSource caching

Systems/CI Updates:

  • FFT swap
  • Fix pydantic dependency for ray>2.9
  • Bump OSX runner images
  • Begin updates for Numpy 2 (WIP)
  • sklearn package updates
  • pytest updates
  • Github Actions checkout and setup-python updates
  • Github Actions setup-miniconda updates
  • gemmi release updates
  • CUDA 12 support and extension environment updates
  • finufft 2.2.0 updates
  • cufinufft 2.2.0 updates
  • black style updates
  • scipy updates for 1.14.0

Documentation:

  • Minor documentation updates
  • Progress bars for common lines methods