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Semantic Segmentation of γ-Alumina/Pt catalytic material in 3D HAADF STEM Tomography

Repository for the code used in " A Deep Learning Approach for Semantic Segmentation of Unbalanced Data in Electron Microscopy of Catalytic Materials."

Python scripts for :

  • U-Net model
  • Train model
  • Evaluate model: DSC, recall, precision scores

Training and validation data sets include ground-truth images and corresponding annotations.

  • Number of classes : 3

    Class labels :

    Background/Pores : 0, γ-Alumina : 1, Pt nanoparticles : 2

  • Image sets are 512x512 pixels patches.

    45 images for training and 15 images for validation

Paper Link

Published paper can be found at: https://www.nature.com/articles/s41598-022-16429-3

Movie of the nanoscale γ-Alumina particle

3D_movie.mp4

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