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anotateform.py
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anotateform.py
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import tkinter as tk
from tkinter import filedialog
import pandas as pd
import datetime
import json
from tkinter import ttk
class CsvEditor:
def __init__(self, root, spieces,user_name,file_name):
self.root = root
self.user_name = user_name
self.file_name = file_name
self.frame = tk.Frame(self.root)
self.frame.pack()
self.load_button = tk.Button(self.frame, text="Load CSV", command=self.load_csv)
self.load_button.pack()
self.load_json_button = tk.Button(self.frame, text="Load JSON", command=self.load_json)
self.load_json_button.pack()
self.skip_button = tk.Button(self.frame, text="Skip", command=self.skip_row, state=tk.DISABLED)
self.skip_button.pack()
self.next_button = tk.Button(self.frame, text="Modified and Next", command=self.next_row, state=tk.DISABLED)
self.next_button.pack()
self.prev_button = tk.Button(self.frame, text="Previous", command=self.prev_row, state=tk.DISABLED)
self.prev_button.pack()
# 入力フィールドを作成します。
self.input_field = tk.Entry(self.frame)
self.input_field.pack()
# ボタンを作成します。
self.jump_button = tk.Button(self.frame, text="Move", command=self.go_to_row)
self.jump_button.pack()
self.entries = []
self.data = None
self.current_row = 0
self.anotated_file = None
self.options = spieces["scientific_name"].tolist()
# list of dicts
#self.list_of_dicts = []
def load(self, filepath):
if filepath:
self.data = pd.read_csv(filepath)
#add a column for self.data
if "deploymentID" not in self.data.columns:
self.data["deploymentID"] = input("Please input the deploymentID: ")
if "scientificName" not in self.data.columns:
self.data["scientificName"] = False
if "lifestage" not in self.data.columns:
self.data["lifestage"] = "unknown"
if "sex" not in self.data.columns:
self.data["sex"] = "unknown"
if "classificationMethod" not in self.data.columns:
self.data["classificationMethod"] = "machine"
if "classifiedBy" not in self.data.columns:
self.data["classifiedBy"] = False
if "classificationTimestamp" not in self.data.columns:
self.data["classificationTimestamp"] = False
self.current_row = 0
# get time within minite
nowmin = str(datetime.datetime.now().strftime("%Y%m%d%H%M"))
# change the file name to new one
file_dir = filepath.split("/")[:-1]
self.anotated_file = "/".join(file_dir) + "/" + self.file_name + "_" + nowmin + ".json"
self.column = self.data.columns[0]
self.column_name_num = {col: num for num, col in enumerate(self.data.columns)}
#print(self.column_name_num)
self.update_form()
def load_csv(self):
filepath = filedialog.askopenfilename(filetypes=[("CSV files", "*.csv")])
self.load(filepath)
def load_json(self):
filepath = filedialog.askopenfilename(filetypes=[("JSON files", "*.json")])
self.load(filepath)
def skip_row(self):
if self.data is not None:
if self.current_row < len(self.data) - 1:
# save the input data to dict from the form
input_dict = {} # Create an empty dictionary to store the input data
for frame, widget in self.entries:
input_data = widget.get()
column = frame.winfo_children()[0].cget("text")
input_dict[column] = input_data # Save the input data to the dictionary
#self.data.at[self.current_row, column] = input_data
#self.list_of_dicts.append(input_dict)
self.current_row += 1
self.update_form()
else:
# save the json file
#with open(self.anotated_file, 'w') as f:
# json.dump(self.list_of_dicts, f)
#close the window
self.root.destroy()
def next_row(self):
if self.data is not None:
now = datetime.datetime.now()
# save the input data to dict from the form
input_dict = {} # Create an empty dictionary to store the input data
for frame, widget in self.entries:
input_data = widget.get()
column = frame.winfo_children()[0].cget("text")
input_dict[column] = input_data # Save the input data to the dictionary
self.data.at[self.current_row, column] = input_data
print(f"scientificName was set to {self.data.at[self.current_row, 'scientificName']} at {now}")
# Save classificationTimestamp and classifiedBy to self.data as well
self.data.at[self.current_row, "classificationTimestamp"] = str(now)
self.data.at[self.current_row, "classifiedBy"] = self.user_name
self.data.at[self.current_row, "classificationMethod"] = "human"
print(f"Next button was clicked at {now}")
print(self.data.iloc[self.current_row])
if self.current_row < len(self.data) - 1:
time_current = datetime.datetime.strptime(self.data.at[self.current_row, 'eventEnd'], "%Y:%m:%d %H:%M:%S")
time_next = datetime.datetime.strptime(self.data.at[self.current_row+1, 'eventStart'], "%Y:%m:%d %H:%M:%S")
time_diff = (time_next - time_current).total_seconds()
if abs(time_diff) < 120:
self.data.at[self.current_row+1, 'scientificName'] = self.data.at[self.current_row, 'scientificName']
self.current_row += 1
self.update_form()
else:
# save the json file
#with open(self.anotated_file, 'w') as f:
# json.dump(self.list_of_dicts, f)
# close the window
self.root.destroy()
def prev_row(self):
if self.data is not None and self.current_row > 0:
# remove latest dict from the list
#self.list_of_dicts.pop()
self.current_row -= 1
self.update_form()
def update_form(self):
for frame, widget in self.entries:
widget.destroy()
frame.destroy()
self.entries = []
# the rest of your code
row_data = self.data.iloc[self.current_row]
for column in self.data.columns:
frame = tk.Frame(self.root)
frame.pack()
label = tk.Label(frame, text=column)
label.pack(side=tk.LEFT)
if column == "scientificName":
combobox = ttk.Combobox(frame, values=self.options)
combobox.set(row_data[column])
combobox.pack(side=tk.LEFT)
self.entries.append((frame, combobox))
elif column == "lifestage":
combobox = ttk.Combobox(frame, values=["adult", "subadult", "juvenile", "unknown"])
combobox.set(row_data[column])
combobox.pack(side=tk.LEFT)
self.entries.append((frame, combobox))
elif column == "sex":
combobox = ttk.Combobox(frame, values=["female", "male", "unknown"])
combobox.set(row_data[column])
combobox.pack(side=tk.LEFT)
self.entries.append((frame, combobox))
else:
entry = tk.Entry(frame)
entry.insert(0, row_data[column])
entry.pack(side=tk.LEFT)
self.entries.append((frame, entry))
self.next_button.config(state=tk.NORMAL if self.current_row < len(self.data) - 1 else tk.DISABLED)
self.skip_button.config(state=tk.NORMAL if self.current_row < len(self.data) - 1 else tk.DISABLED)
self.prev_button.config(state=tk.NORMAL if self.current_row > 0 else tk.DISABLED)
def save_on_interrupt(self):
# save the json file
#with open(self.anotated_file, 'w') as f:
# json.dump(self.list_of_dicts, f)
print(f"Data saved to {self.anotated_file} due to interrupt.")
#print(self.list_of_dicts)
# form a dataframe from the list of dicts
self_anotate_csv = self.anotated_file.replace(".json", ".csv")
self.data.to_csv(self_anotate_csv, index=False)
def on_close(self):
self.save_on_interrupt()
self.root.destroy()
def go_to_row(self):
# ユーザーが入力した値を取得します。
input_value = self.input_field.get()
# 入力値に対応する行を検索します。
matching_rows = self.data[self.data["file"] == input_value]
#print(matching_rows)
if not matching_rows.empty:
# 最初の一致する行を現在の行として設定します。
self.current_row = matching_rows.index[0]
# フォームを更新します。
self.update_form()
if __name__ == "__main__":
user_name = input("Please input your name: ")
file_name = input("Please input the file name: ")
spieces = pd.read_csv("spieces_name.csv")
root = tk.Tk()
editor = CsvEditor(root, spieces,user_name,file_name)
root.protocol("WM_DELETE_WINDOW", editor.on_close)
try:
root.mainloop()
except:
editor.save_on_interrupt()
raise