diff --git a/_pages/publications.md b/_pages/publications.md index 55a715d404e9d..d2cfb4687aa9d 100644 --- a/_pages/publications.md +++ b/_pages/publications.md @@ -16,6 +16,7 @@ author_profile: true * Zhao, C., Liu, A., Zhang, X., **Cao, X.**, Ding, Z., Sha, Q., Shen, H., Deng, H.W.\* & Zhou, W.\* CLCLSA: Cross-omics Linked embedding with Contrastive Learning and Self Attention for multi-omics integration with incomplete multi-omics data. 2023+. *Submitted in August 2023*. [arXiv](https://arxiv.org/abs/2304.05542) * **Cao, X.**\#, Zhu, L.\#, Liang, X., Zhang, S. & Sha, Q.\* (2023+). Constructing genotype and phenotype network helps reveal disease heritability and phenome-wide association studies. *Will be submitted soon* [software](https://github.com/xueweic/GPN) * Zhu, L., Yan, S., **Cao, X.**, Sha, Q. & Zhang, S.\* (2023+). Integrating external controls by regression calibration for genome-wide association study. *Will be submitted soon* +* Zhao, C.\#, Su, K.\#, Wu, C., **Cao, X.**, Sha, Q., Li, W., Luo, Z., Qin, T., Qiu, C., Liu, A., Jiang, L., Zhang, X., Shen, H., Deng, H.W.\* & Zhou, W.\* (2023+). Multi-View Variational Autoencoder for Missing Value Imputation in Untargeted Metabolomics. *Will be submitted soon* ## \[2023\] * **Cao, X.**\#, Zhang, L.\#, Islam, M.K., Zhao, M., He, C., Zhang, K., Liu, S., Sha, Q.\* & Wei, H.\*, (2023). TGPred: efficient methods for predicting target genes of a transcription factor by integrating statistics, machine learning and optimization. *NAR Genomics and Bioinformatics*, 5(3), p.lqad083. [doi](https://doi.org/10.1093/nargab/lqad083) @@ -29,4 +30,4 @@ author_profile: true * Liang, X., **Cao, X.**, Sha, Q. & Zhang, S.\* (2022). HCLC-FC: a Novel Statistical Method for Phenome-Wide Association Studies. *PLOS ONE*. 17(11): e0276646. [doi](https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0276646) ## \[2021\] -* Boby, N.\#, **Cao, X.**\#, Ransom, A., Pace, B.T., Mabee, C., Shroyer, M.N., Das, A., Didier, P.J., Srivastav, S.K., Porter, E., Sha, Q. & Pahar, B.\* (2021) Identification, Characterization, and Transcriptional Reprogramming of Epithelial Stem Cells and Intestinal Enteroids in Simian Immunodeficiency Virus Infected Rhesus Macaques. *Frontiers in Immunology*. 12, p.769990. [doi](https://www.frontiersin.org/articles/10.3389/fimmu.2021.769990/full) \ No newline at end of file +* Boby, N.\#, **Cao, X.**\#, Ransom, A., Pace, B.T., Mabee, C., Shroyer, M.N., Das, A., Didier, P.J., Srivastav, S.K., Porter, E., Sha, Q. & Pahar, B.\* (2021) Identification, Characterization, and Transcriptional Reprogramming of Epithelial Stem Cells and Intestinal Enteroids in Simian Immunodeficiency Virus Infected Rhesus Macaques. *Frontiers in Immunology*. 12, p.769990. [doi](https://www.frontiersin.org/articles/10.3389/fimmu.2021.769990/full)