{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":425136918,"defaultBranch":"main","name":"STAARpipeline-Tutorial","ownerLogin":"xihaoli","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2021-11-06T02:26:12.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/10686191?v=4","public":true,"private":false,"isOrgOwned":false},"refInfo":{"name":"","listCacheKey":"v0:1658348812.489855","currentOid":""},"activityList":{"items":[{"before":"3e1361c7d970ab3496f061f4a856306ab37ee3b2","after":"b5ed2a8f3c282d4cbd19bf953bd21279c60cb14b","ref":"refs/heads/main","pushedAt":"2024-06-14T01:39:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"xihaoli","name":"Xihao Li","path":"/xihaoli","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10686191?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"ab899597ecf59362af97c1903907fc02ef219dba","after":"3e1361c7d970ab3496f061f4a856306ab37ee3b2","ref":"refs/heads/main","pushedAt":"2024-06-13T19:49:44.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"xihaoli","name":"Xihao Li","path":"/xihaoli","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10686191?s=80&v=4"},"commit":{"message":"STAARpipeline","shortMessageHtmlLink":"STAARpipeline"}},{"before":"84a075c2cc4f042ce9b31229cca691c7574ca24b","after":"ab899597ecf59362af97c1903907fc02ef219dba","ref":"refs/heads/main","pushedAt":"2024-06-13T19:45:30.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"xihaoli","name":"Xihao Li","path":"/xihaoli","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10686191?s=80&v=4"},"commit":{"message":"STAARpipeline","shortMessageHtmlLink":"STAARpipeline"}},{"before":"2893402d9d5a797c307fd9d05b636f02e318ba86","after":"84a075c2cc4f042ce9b31229cca691c7574ca24b","ref":"refs/heads/main","pushedAt":"2024-06-13T19:32:26.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"xihaoli","name":"Xihao Li","path":"/xihaoli","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10686191?s=80&v=4"},"commit":{"message":"Merge branch 'main' of https://github.com/xihaoli/STAARpipeline-Tutorial","shortMessageHtmlLink":"Merge branch 'main' of https://github.com/xihaoli/STAARpipeline-Tutorial"}},{"before":"002eb2f76cf8b3bc29500ca822aa584de0b2fd52","after":"2893402d9d5a797c307fd9d05b636f02e318ba86","ref":"refs/heads/main","pushedAt":"2024-06-13T18:31:55.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"xihaoli","name":"Xihao Li","path":"/xihaoli","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10686191?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"0409bd2141af7e692115fcbb3f68b708274cee37","after":"002eb2f76cf8b3bc29500ca822aa584de0b2fd52","ref":"refs/heads/main","pushedAt":"2024-06-13T18:21:53.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"xihaoli","name":"Xihao Li","path":"/xihaoli","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10686191?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"77912ad689b64642d9acd15548666bb46f27d005","after":"0409bd2141af7e692115fcbb3f68b708274cee37","ref":"refs/heads/main","pushedAt":"2024-06-13T18:21:29.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"xihaoli","name":"Xihao Li","path":"/xihaoli","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10686191?s=80&v=4"},"commit":{"message":"Merge branch 'main' of https://github.com/xihaoli/STAARpipeline-Tutorial","shortMessageHtmlLink":"Merge branch 'main' of https://github.com/xihaoli/STAARpipeline-Tutorial"}},{"before":"3e7c8ffc8f7b72d067cfca88ec89a248cb5a5f2e","after":"77912ad689b64642d9acd15548666bb46f27d005","ref":"refs/heads/main","pushedAt":"2024-05-20T18:31:21.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"LVMEHINOVIC","name":"Elle Mehinovic","path":"/LVMEHINOVIC","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/130782571?s=80&v=4"},"commit":{"message":"STAARpipeline","shortMessageHtmlLink":"STAARpipeline"}},{"before":"68f952779783ff92e05d17dc77a8b560a9eb6218","after":"3e7c8ffc8f7b72d067cfca88ec89a248cb5a5f2e","ref":"refs/heads/main","pushedAt":"2024-05-20T18:00:43.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"LVMEHINOVIC","name":"Elle Mehinovic","path":"/LVMEHINOVIC","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/130782571?s=80&v=4"},"commit":{"message":"STAARpipeline","shortMessageHtmlLink":"STAARpipeline"}},{"before":"763a4a8233c2b3aabd1f1b387670a5c64c14d685","after":"68f952779783ff92e05d17dc77a8b560a9eb6218","ref":"refs/heads/main","pushedAt":"2024-05-17T21:27:16.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"LVMEHINOVIC","name":"Elle Mehinovic","path":"/LVMEHINOVIC","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/130782571?s=80&v=4"},"commit":{"message":"STAARpipeline\n\nThis function/script is designed to efficiently convert and/or merge various file types—including VCF, CSV, TXT, and RData—into a single R data object. It adeptly selects data based on specific criteria, such as matching chromosomes, genomic positions in the aGDS file, and variant types. Although it does not provide exact matches within the aGDS file, its primary function is to streamline the reading, filtering, and merging of variant files, significantly reducing memory consumption and alleviating current and future processing bottlenecks.","shortMessageHtmlLink":"STAARpipeline"}},{"before":"bbeb080c75795ce6b9353453278c39ac15da1454","after":"763a4a8233c2b3aabd1f1b387670a5c64c14d685","ref":"refs/heads/main","pushedAt":"2024-05-13T01:42:49.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"xihaoli","name":"Xihao Li","path":"/xihaoli","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10686191?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"e3e2da81a81580d84aa42bdb1a9818985119db22","after":"bbeb080c75795ce6b9353453278c39ac15da1454","ref":"refs/heads/main","pushedAt":"2024-05-13T01:11:55.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"xihaoli","name":"Xihao Li","path":"/xihaoli","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10686191?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"7e2e8c34db26a0bca0093b554233ec3760c649b4","after":"e3e2da81a81580d84aa42bdb1a9818985119db22","ref":"refs/heads/main","pushedAt":"2024-05-13T00:29:54.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"xihaoli","name":"Xihao Li","path":"/xihaoli","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10686191?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"55cb8c309c465087aa4d041f253503b754dbb344","after":"7e2e8c34db26a0bca0093b554233ec3760c649b4","ref":"refs/heads/main","pushedAt":"2024-04-25T22:42:03.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"xihaoli","name":"Xihao Li","path":"/xihaoli","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10686191?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"a8eb217529e28461760d7c9af8c5a71c747c9e85","after":"55cb8c309c465087aa4d041f253503b754dbb344","ref":"refs/heads/main","pushedAt":"2024-04-25T22:32:28.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"xihaoli","name":"Xihao Li","path":"/xihaoli","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10686191?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"613623822e9f32e726ad8afc35658a12ad1e28c6","after":"a8eb217529e28461760d7c9af8c5a71c747c9e85","ref":"refs/heads/main","pushedAt":"2024-04-25T22:29:50.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"xihaoli","name":"Xihao Li","path":"/xihaoli","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10686191?s=80&v=4"},"commit":{"message":"Add BGEN to GDS conversion","shortMessageHtmlLink":"Add BGEN to GDS conversion"}},{"before":"e6168adbf9c2bbb9b52c454ad8e3c50a3c4d6a51","after":"613623822e9f32e726ad8afc35658a12ad1e28c6","ref":"refs/heads/main","pushedAt":"2024-04-25T22:28:00.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"xihaoli","name":"Xihao Li","path":"/xihaoli","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10686191?s=80&v=4"},"commit":{"message":"Revert \"Add BGEN to GDS conversion\"\n\nThis reverts commit e6168adbf9c2bbb9b52c454ad8e3c50a3c4d6a51.","shortMessageHtmlLink":"Revert \"Add BGEN to GDS conversion\""}},{"before":"830d10e04434fd7835d09177f12c414f1d251757","after":"e6168adbf9c2bbb9b52c454ad8e3c50a3c4d6a51","ref":"refs/heads/main","pushedAt":"2024-04-25T22:26:43.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"xihaoli","name":"Xihao Li","path":"/xihaoli","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10686191?s=80&v=4"},"commit":{"message":"Add BGEN to GDS conversion","shortMessageHtmlLink":"Add BGEN to GDS conversion"}},{"before":"792f1c47e4f7762709a1e186b7a9a4b60a60e34d","after":"830d10e04434fd7835d09177f12c414f1d251757","ref":"refs/heads/main","pushedAt":"2024-02-24T17:30:07.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"xihaoli","name":"Xihao Li","path":"/xihaoli","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10686191?s=80&v=4"},"commit":{"message":"FAVORannotator_csv","shortMessageHtmlLink":"FAVORannotator_csv"}},{"before":"96eca330053285dee45f9c4ff2b430ee03f44c05","after":"792f1c47e4f7762709a1e186b7a9a4b60a60e34d","ref":"refs/heads/main","pushedAt":"2024-02-24T17:26:25.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"xihaoli","name":"Xihao Li","path":"/xihaoli","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10686191?s=80&v=4"},"commit":{"message":"FAVORannotator_csv","shortMessageHtmlLink":"FAVORannotator_csv"}},{"before":"cccf8f5d80d3ac7656de341d1e7fee47cdcc4325","after":"96eca330053285dee45f9c4ff2b430ee03f44c05","ref":"refs/heads/main","pushedAt":"2024-02-20T19:04:12.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"xihaoli","name":"Xihao Li","path":"/xihaoli","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10686191?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"430a5da394c048d2fdecae426241facee3ce3467","after":"cccf8f5d80d3ac7656de341d1e7fee47cdcc4325","ref":"refs/heads/main","pushedAt":"2024-02-20T18:39:15.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"xihaoli","name":"Xihao Li","path":"/xihaoli","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10686191?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"d376bce45708c5ccf8b8ad23ca23d6f0af871eb0","after":"430a5da394c048d2fdecae426241facee3ce3467","ref":"refs/heads/main","pushedAt":"2024-02-18T21:55:01.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"xihaoli","name":"Xihao Li","path":"/xihaoli","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10686191?s=80&v=4"},"commit":{"message":"STAARpipeline","shortMessageHtmlLink":"STAARpipeline"}},{"before":"8ccbaa51e9633c72b18238e98d350489660c04b9","after":"d376bce45708c5ccf8b8ad23ca23d6f0af871eb0","ref":"refs/heads/main","pushedAt":"2024-02-18T21:46:25.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"xihaoli","name":"Xihao Li","path":"/xihaoli","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10686191?s=80&v=4"},"commit":{"message":"STAARpipeline","shortMessageHtmlLink":"STAARpipeline"}},{"before":"872c7d6387857b9bbce7e71d7dd377b6e072caeb","after":"8ccbaa51e9633c72b18238e98d350489660c04b9","ref":"refs/heads/main","pushedAt":"2024-02-17T23:26:21.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"xihaoli","name":"Xihao Li","path":"/xihaoli","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10686191?s=80&v=4"},"commit":{"message":"STAARpipeline","shortMessageHtmlLink":"STAARpipeline"}},{"before":"e10b8783d43a9bee61c805e7fd0da11376461222","after":"872c7d6387857b9bbce7e71d7dd377b6e072caeb","ref":"refs/heads/main","pushedAt":"2024-02-17T03:22:29.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"xihaoli","name":"Xihao Li","path":"/xihaoli","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10686191?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"e2e87fec73bc79dbbd27fc432e14613d993bb24d","after":"e10b8783d43a9bee61c805e7fd0da11376461222","ref":"refs/heads/main","pushedAt":"2024-02-17T02:07:40.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"xihaoli","name":"Xihao Li","path":"/xihaoli","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10686191?s=80&v=4"},"commit":{"message":"STAARpipeline","shortMessageHtmlLink":"STAARpipeline"}},{"before":"cbe0ac61158cb1dcafd25c68c87780de28eb7de1","after":"e2e87fec73bc79dbbd27fc432e14613d993bb24d","ref":"refs/heads/main","pushedAt":"2024-02-06T03:42:14.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"xihaoli","name":"Xihao Li","path":"/xihaoli","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10686191?s=80&v=4"},"commit":{"message":"STAARpipeline","shortMessageHtmlLink":"STAARpipeline"}},{"before":"d1c1c009c92a2c052b99e8fcc2b494b85c5b4b04","after":"cbe0ac61158cb1dcafd25c68c87780de28eb7de1","ref":"refs/heads/main","pushedAt":"2024-02-06T03:35:36.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"xihaoli","name":"Xihao Li","path":"/xihaoli","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10686191?s=80&v=4"},"commit":{"message":"STAARpipeline","shortMessageHtmlLink":"STAARpipeline"}},{"before":"f92b5bccff519d1050837f5c78d4fd1b5c945aac","after":"d1c1c009c92a2c052b99e8fcc2b494b85c5b4b04","ref":"refs/heads/main","pushedAt":"2023-09-11T16:28:14.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"xihaoli","name":"Xihao Li","path":"/xihaoli","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/10686191?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEZP1lNwA","startCursor":null,"endCursor":null}},"title":"Activity · xihaoli/STAARpipeline-Tutorial"}