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clustered motifs for invertebrates #282

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perinom opened this issue Oct 24, 2022 · 1 comment
Open

clustered motifs for invertebrates #282

perinom opened this issue Oct 24, 2022 · 1 comment

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@perinom
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perinom commented Oct 24, 2022

Hi Simon,

great tool, I missed using it!

any chance you have a Drosophila/arthropods/insects/invertebrates version of the clustered vertebrate motifs like gimme.vertebrate.v5.0?
Or a code template to generate it?

Thanks!
@simonvh
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simonvh commented Oct 28, 2022

I don't I'm afraid. I can't seem to locate the script used to create the database. I would suggest to try `JASPAR2022_insects.pfm.

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@simonvh @perinom