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CI Codespaces Prebuilds

Template for MLOPs projects with GPU

CONDA IS NOT NEEDED AS A PACKAGE MANAGER. All setup is done using the Python Software Foundation recommended tools: virtualenv and pip and mainstream production tools Docker. Please see PEP 453 "officially recommend the use of pip as the default installer for Python packages"

GitHub Codespaces are FREE for education and as are GPU Codespaces as of this writing in December 2022

  1. First thing to do on launch is to open a new shell and verify virtualenv is sourced.

Things included are:

  • Makefile

  • Pytest

  • pandas

  • Pylint or ruff

  • Dockerfile

  • GitHub copilot

  • jupyter and ipython

  • Most common Python libraries for ML/DL and Hugging Face

  • githubactions

Two fun tools to explore:

  • Zero-shot classification: ./hugging-face/zero_shot_classification.py classify
  • Yake for candidate label creation: ./utils/kw_extract.py

Try out Bento

docker run -it --rm -p 8888:8888 -p 3000:3000 -p 3001:3001 bentoml/quickstart:latest

Verify GPU works

The following examples test out the GPU (including Docker GPU)

  • run pytorch training test: python utils/quickstart_pytorch.py
  • run pytorch CUDA test: python utils/verify_cuda_pytorch.py
  • run tensorflow training test: python utils/quickstart_tf2.py
  • run nvidia monitoring test: nvidia-smi -l 1 it should show a GPU
  • run whisper transcribe test ./utils/transcribe-whisper.sh and verify GPU is working with nvidia-smi -l 1
  • run lspci | grep -i nvidia you should see something like: 0001:00:00.0 3D controller: NVIDIA Corporation GV100GL [Tesla V100 PCIe 16GB] (rev a1)

Additionally, this workspace is setup to fine-tune Hugging Face

fine-tune

python hugging-face/hf_fine_tune_hello_world.py

Verify containerized GPU works for Tensorflow

Because of potential versioning conflicts between PyTorch and Tensorflow it is recommended to run Tensorflow via GPU Container and PyTorch via default environment.

See TensorFlow GPU documentation

  • Run docker run --gpus all -it --rm tensorflow/tensorflow:latest-gpu \ python -c "import tensorflow as tf; print(tf.reduce_sum(tf.random.normal([1000, 1000])))"

  • Also interactively explore: docker run --gpus all -it --rm tensorflow/tensorflow:latest-gpu, then when inside run: apt-get update && apt-get install pciutils then lspci | grep -i nvidia

  • To mount the code into your container: docker run --gpus all -it --rm -v $(pwd):/tmp tensorflow/tensorflow:latest-gpu /bin/bash. Then do apt-get install -y git && cd /tmp. Then all you need to do is run make install. Now you can verify you can train deep learning models by doing python utils/quickstart_tf2.py

More Tensorflow GPU Ideas

https://www.tensorflow.org/resources/recommendation-systems

# Deploy the retrieval model with TensorFlow Serving
docker run -t --rm -p 8501:8501 \
  -v "RETRIEVAL/MODEL/PATH:/models/retrieval" \
  -e MODEL_NAME=retrieval tensorflow/serving &

Setup Docker Toolkit NVidia

mlops-tensorflow-gpu

Used in Following Projects

Used as the base and customized in the following Duke MLOps and Applied Data Engineering Coursera Labs:

References