LAMMPS input from lammpstutorials.github.io
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Updated
May 26, 2024 - Jupyter Notebook
LAMMPS input from lammpstutorials.github.io
Collective variables library for molecular simulation and analysis programs
Config file generator for easier simulations with the Nanoscale Molecular Dynamics (NAMD) software.
command-line interface configuration files
RMD_digging is aimed to provide pre-processing and post-processing tools for the reactive molecular dynamics (ReaxFF) simulations based on MATLAB language, including formatting the reactive force field parameters, statistic anasysis of structures, trajectories and mechanisms and output of the visualization files.
vmdAssist is a VMD extension with tools that help us edit or create new structures like nanotube and nanotorus.
CEEMDAN_LSTM is a Python project for decomposition-integration forecasting models based on EMD methods and LSTM.
Variational Mode Decomposition in Python using the Rust vmd-rs crate
Generate Carbon Nano-Cones using VMD
A script to convert multiple pdb files to a single xyz file using VMD
vmd(MMDモーションデータ)を、指定されたモデルに適用したサイズで再生成します。
Variational Mode Decomposition in Rust.
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