jbrowse
Here are 35 public repositories matching this topic...
BioJS based Sequence Viewer plugin for the GMOD JBrowse genome browser
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Apr 8, 2016 - JavaScript
ADAMA web-service wrapper to transform "Translated small ORFs" GFF3 data (Hsu et al. 2016) into JBrowse compatible JSON
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Jan 14, 2018 - Python
ADAMA web-service wrapper to transform "Chromatin States" GFF3 data into JBrowse compatible JSON
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Nov 10, 2015 - Python
JBrowse plugin enabling the ability to enrich the 1001 Genomes Variants track with metadata from 1001genomes.org Master Accession List API
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May 4, 2017 - JavaScript
Custom JBrowse plugin to map JBrowse/Store/SeqFeature/REST to the Araport Adama API endpoints
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May 4, 2017 - JavaScript
No longer actively developed...See README
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Aug 24, 2017 - JavaScript
JBrowse plugin enabling the ability to enrich the Ensembl Variants (VCF) track with metadata from rest.ensemblgenomes.org API
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May 4, 2017 - JavaScript
A simple Shiny app for visualizing Sars-CoV-2 data.
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Mar 9, 2021 - R
JBrowse plugin enabling the ability to dynamically load tracks from data/configurations stored in the Cyverse Data Store
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Apr 21, 2017 - JavaScript
Backup an apollo instance to a git repository
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Jun 1, 2017 - Python
External JB2 plugin implementing a QuantitativeSequence track for displaying base-resolution models.
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Jun 5, 2024 - TypeScript
JBrowse plugin that supports smallRNA alignments
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Apr 8, 2019 - JavaScript
JBrowse plugin to display multiple BigWig tracks as a stacked proportion
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Jul 6, 2018 - JavaScript
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