LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.
-
Updated
Nov 24, 2022 - R
LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.
Older repo for MRLocus. See new website for software usage guide:
Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression
A workflow based on QTLtools to run cis- and trans-QTL analyses.
NPDR: Nearest-neighbor Projected-Distance Regression with the generalized linear model
Experimental design framework for scRNAseq population studies (eQTL and DE)
Application of the Simple Sum method for testing co-localization of GWAS with any other SNP-level data (e.g. eQTL data)
Using real genotype data, simulate a complex trait as a function of latent expression, fit eQTL weights in independent data, and perform GWAS/TWAS on complex trait.
Analysis of regulatory impacts of GWAS SNPs associated with psychiatric disorders and cognitive functioning.
An Online Database of 3D Chromatin Structure
De novo discovery of traits co-occurring with chronic obstructive pulmonary disease.
fastQTL analysis of methylation and expression data
Computationally efficient and statistically powerful software for detecting context-specific eQTL effects in multi-context genomic studies.
A lightweight Julia package for eQTL genome scans near real-time.
Add a description, image, and links to the eqtl topic page so that developers can more easily learn about it.
To associate your repository with the eqtl topic, visit your repo's landing page and select "manage topics."