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add cellrank krylov optimised packages back in #2

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le-ander opened this issue Mar 2, 2022 · 4 comments
Open

add cellrank krylov optimised packages back in #2

le-ander opened this issue Mar 2, 2022 · 4 comments

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@le-ander
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le-ander commented Mar 2, 2022

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@Zethson
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Zethson commented Apr 25, 2022

Do you have an update here?

@le-ander
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No, getting this to run is rather tricky without conda. I'd day let's see if it runs at acceptable speed without these packages first yor your usecase.

@Zethson
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Zethson commented Apr 25, 2022

All right. FYI @WeilerP @AnnaChristina

@WeilerP
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WeilerP commented Apr 25, 2022

Could work depending on the size of the dataset. For the tutorials using the VelocityKernel and CytoTRACEKernel, we're only using the vanilla CellRank installation, i.e., no petsc or slepc.

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