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Julia Dependency Update (#274) #363

Julia Dependency Update (#274)

Julia Dependency Update (#274) #363

Workflow file for this run

name: CI
on:
workflow_dispatch:
push:
branches: [main]
pull_request:
branches: [main]
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
env:
NBCONVERT_JOBS: '4'
LITERATE_PROC: '3'
ALLOWERRORS: 'false'
CACHE_NUM: '2'
JULIA_CONDAPKG_BACKEND: 'Null'
JULIA_CI: 'true'
JULIA_CPU_TARGET: 'generic;sandybridge,-xsaveopt,clone_all;haswell,-rdrnd,base(1);znver3,clone_all'
NBCACHE: '.cache'
UV_SYSTEM_PYTHON: 1
jobs:
CI:
runs-on: ubuntu-latest
steps:
- name: Checkout repository
uses: actions/checkout@v4
- name: Setup Python
uses: actions/setup-python@v5
id: setup-python
with:
python-version: '3.x'
- name: Install uv
run: curl -LsSf https://astral.sh/uv/install.sh | sh
- name: Install Python dependencies
run: uv pip install -r requirements.txt
- name: Cache executed notebooks
uses: actions/cache@v4
id: cache-nb
with:
path: ${{ env.NBCACHE }}
key: ${{ runner.os }}-nb-${{ env.CACHE_NUM }}-${{ hashFiles('src/**', 'Project.toml', 'Manifest.toml', 'requirements.txt') }}-${{ hashFiles('docs/**/*.ipynb', 'docs/**/*.jl') }}
restore-keys: |
${{ runner.os }}-nb-${{ env.CACHE_NUM }}-${{ hashFiles('src/**', 'Project.toml', 'Manifest.toml', 'requirements.txt') }}-
- name: Read Julia version
uses: SebRollen/[email protected]
id: read_toml
with:
file: 'Manifest.toml'
field: 'julia_version'
- name: Setup Julia
uses: julia-actions/setup-julia@v2
with:
version: ${{ steps.read_toml.outputs.value }}
- name: Restore Julia packages
uses: actions/cache/restore@v4
if: ${{ contains(runner.name, 'GitHub Actions') }}
id: cache-julia
with:
path: |
~/.julia
!~/.julia/registries
key: ${{ runner.os }}-julia-${{ env.CACHE_NUM }}-${{ steps.read_toml.outputs.value }}-${{ hashFiles('src/**', 'Project.toml', 'Manifest.toml') }}
restore-keys: |
${{ runner.os }}-julia-${{ env.CACHE_NUM }}-${{ steps.read_toml.outputs.value }}-
- name: Install Julia packages
if: ${{ !contains(runner.name, 'GitHub Actions') || steps.cache-julia.outputs.cache-hit != 'true' }}
shell: julia --color=yes {0}
run: |
using Pkg, Dates
Pkg.add(["IJulia", "Literate", "PrettyTables", "JSON"])
Pkg.activate(".")
Pkg.instantiate()
Pkg.precompile()
Pkg.gc(collect_delay=Day(0))
- name: Save Julia packages
uses: actions/cache/save@v4
if: ${{ contains(runner.name, 'GitHub Actions') && steps.cache-julia.outputs.cache-hit != 'true' }}
with:
path: |
~/.julia
!~/.julia/registries
key: ${{ steps.cache-julia.outputs.cache-primary-key }}
- name: Run notebooks
run: julia --color=yes -p ${{ env.LITERATE_PROC }} --heap-size-hint=4G run.jl
- name: Copy back built notebooks
run: cp --verbose -rf ${{ env.NBCACHE }}/docs/* docs/
- name: Build website
run: jupyter-book build docs/
- name: Upload pages artifact
if: ${{ github.ref == 'refs/heads/main' }}
uses: actions/upload-pages-artifact@v3
with:
path: docs/_build/html/
# Deploy pages
deploy:
needs: CI
if: ${{ github.ref == 'refs/heads/main' }}
# Grant GITHUB_TOKEN the permissions required to make a Pages deployment
permissions:
pages: write # to deploy to Pages
id-token: write # to verify the deployment originates from an appropriate source
actions: read # to download an artifact uploaded by `actions/upload-pages-artifact@v3`
environment:
name: github-pages
url: ${{ steps.deployment.outputs.page_url }}
runs-on: ubuntu-latest
steps:
- name: Deploy to GitHub Pages
id: deployment
uses: actions/deploy-pages@v4