Julia Dependency Update (#273) #360
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
name: CI | |
on: | |
workflow_dispatch: | |
push: | |
branches: [main] | |
pull_request: | |
branches: [main] | |
concurrency: | |
group: ${{ github.workflow }}-${{ github.ref }} | |
cancel-in-progress: true | |
env: | |
NBCONVERT_JOBS: '4' | |
LITERATE_PROC: '3' | |
ALLOWERRORS: 'false' | |
CACHE_NUM: '1' | |
JULIA_CONDAPKG_BACKEND: 'Null' | |
JULIA_CI: 'true' | |
NBCACHE: '.cache' | |
jobs: | |
CI: | |
runs-on: ubuntu-latest | |
steps: | |
- name: Checkout repository | |
uses: actions/checkout@v4 | |
- name: Setup Python | |
uses: actions/setup-python@v5 | |
id: setup-python | |
with: | |
python-version: '3.x' | |
- name: Cache python venv | |
uses: actions/cache@v4 | |
if: ${{ contains(runner.name, 'GitHub Actions') }} | |
id: cache-venv | |
with: | |
key: venv-${{ runner.os }}-${{ steps.setup-python.outputs.python-version }}-${{ hashFiles('requirements.txt') }} | |
path: .venv | |
- name: Install Python dependencies | |
run: | | |
python -m venv .venv | |
source .venv/bin/activate | |
python -m pip install -r requirements.txt | |
echo "${VIRTUAL_ENV}/bin" >> $GITHUB_PATH | |
echo "VIRTUAL_ENV=${VIRTUAL_ENV}" >> $GITHUB_ENV | |
echo "PYTHON=${VIRTUAL_ENV}/bin/python" >> $GITHUB_ENV | |
echo "JULIA_PYTHONCALL_EXE=${VIRTUAL_ENV}/bin/python">> $GITHUB_ENV | |
- name: Cache executed notebooks | |
uses: actions/cache@v4 | |
id: cache-nb | |
with: | |
path: ${{ env.NBCACHE }} | |
key: ${{ runner.os }}-nb-${{ env.CACHE_NUM }}-${{ hashFiles('src/**', 'Project.toml', 'Manifest.toml', 'requirements.txt') }}-${{ hashFiles('docs/**/*.ipynb', 'docs/**/*.jl') }} | |
restore-keys: | | |
${{ runner.os }}-nb-${{ env.CACHE_NUM }}-${{ hashFiles('src/**', 'Project.toml', 'Manifest.toml', 'requirements.txt') }}- | |
- name: Read Julia version | |
uses: SebRollen/[email protected] | |
id: read_toml | |
with: | |
file: 'Manifest.toml' | |
field: 'julia_version' | |
- name: Setup Julia | |
uses: julia-actions/setup-julia@v2 | |
with: | |
version: ${{ steps.read_toml.outputs.value }} | |
- name: Restore Julia packages | |
uses: actions/cache/restore@v4 | |
if: ${{ contains(runner.name, 'GitHub Actions') }} | |
id: cache-julia | |
with: | |
path: | | |
~/.julia | |
!~/.julia/registries | |
key: ${{ runner.os }}-julia-${{ env.CACHE_NUM }}-${{ steps.read_toml.outputs.value }}-${{ hashFiles('src/**', 'Project.toml', 'Manifest.toml') }} | |
restore-keys: | | |
${{ runner.os }}-julia-${{ env.CACHE_NUM }}-${{ steps.read_toml.outputs.value }}- | |
- name: Install Julia packages | |
if: ${{ !contains(runner.name, 'GitHub Actions') || steps.cache-julia.outputs.cache-hit != 'true' }} | |
shell: julia --color=yes {0} | |
run: | | |
using Pkg, Dates | |
Pkg.add(["IJulia", "Literate", "PrettyTables", "JSON"]) | |
Pkg.activate(".") | |
Pkg.instantiate() | |
Pkg.precompile() | |
Pkg.gc(collect_delay=Day(0)) | |
- name: Save Julia packages | |
uses: actions/cache/save@v4 | |
if: ${{ contains(runner.name, 'GitHub Actions') && steps.cache-julia.outputs.cache-hit != 'true' }} | |
with: | |
path: | | |
~/.julia | |
!~/.julia/registries | |
key: ${{ steps.cache-julia.outputs.cache-primary-key }} | |
- name: Run notebooks | |
run: julia --color=yes -p ${{ env.LITERATE_PROC }} --heap-size-hint=4G run.jl | |
- name: Copy back built notebooks | |
run: cp --verbose -rf ${{ env.NBCACHE }}/docs/* docs/ | |
- name: Build website | |
run: jupyter-book build docs/ | |
- name: Upload pages artifact | |
if: ${{ github.ref == 'refs/heads/main' }} | |
uses: actions/upload-pages-artifact@v3 | |
with: | |
path: docs/_build/html/ | |
# Deploy pages | |
deploy: | |
needs: CI | |
if: ${{ github.ref == 'refs/heads/main' }} | |
# Grant GITHUB_TOKEN the permissions required to make a Pages deployment | |
permissions: | |
pages: write # to deploy to Pages | |
id-token: write # to verify the deployment originates from an appropriate source | |
actions: read # to download an artifact uploaded by `actions/upload-pages-artifact@v3` | |
environment: | |
name: github-pages | |
url: ${{ steps.deployment.outputs.page_url }} | |
runs-on: ubuntu-latest | |
steps: | |
- name: Deploy to GitHub Pages | |
id: deployment | |
uses: actions/deploy-pages@v4 |