Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Tests fail for newer versions of anndata or mudata #12

Open
berombau opened this issue Sep 25, 2024 · 0 comments
Open

Tests fail for newer versions of anndata or mudata #12

berombau opened this issue Sep 25, 2024 · 0 comments
Labels
bug Something isn't working

Comments

@berombau
Copy link
Member

Report

Tests fail for versions higher than "mudata<=0.2.4" and "anndata<=0.10.8". Something maybe to do with the deepcopy behaviour. Fix for now with extra version requirements and look into later.

https://github.com/saeyslab/FlowSOM_Python/actions/runs/11030937322/job/30636612863

/opt/hostedtoolcache/Python/3.11.10/x64/lib/python3.11/site-packages/flowsom/main.py:401: in new_data
   fsom_new = copy.deepcopy(self)

Version information

No response
@berombau berombau added the bug Something isn't working label Sep 25, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
bug Something isn't working
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@berombau