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NEWS
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CHANGES IN VERSION 1.39.2
-------------------------
o Move `applyProcessing()`, `processingChunksize()`, `processingChunkSize()<-`
and `processingChunkFactor()` generics from the Spectra package.
CHANGES IN VERSION 1.39.1
-------------------------
o Add `extractByIndex()` generic.
CHANGES IN VERSION 1.37.1
-------------------------
o Add `estimatePrecursorIntensity()` generic.
CHANGES IN VERSION 1.35.4
-------------------------
o Move `backendParallelFactor` and `backendBpparam` and `supportsSetBackend`
generics from `Spectra`.
CHANGES IN VERSION 1.35.3
-------------------------
o Move `backendInitialize`, `backendMerge`, `setBackend`, `isReadOnly`,
`peaksData`, `peaksData<-` and `peaksVariables`, `filterRanges`,
`filterValues`, `filterPrecursorMzRange`, `filterPrecursorMzValues`,
`filterProductMzRange`, `filterProductMzValues` generics from the
Spectra package.
CHANGES IN VERSION 1.35.2
-------------------------
o Add `filterSpectra` generic.
CHANGES IN VERSION 1.35.1
-------------------------
o Add `filterFeatures` generic.
CHANGES IN VERSION 1.33.1
-------------------------
o Rename uniqueMsLevel() to uniqueMsLevels()
CHANGES IN VERSION 1.29.1
-------------------------
o Add spectrapply generic
CHANGES IN VERSION 1.27.2
-------------------------
o Add addProcessing generic <2022-01-04 Tue>
CHANGES IN VERSION 1.27.1
-------------------------
o Add new adjacencyMatrix generic <2021-12-11 Sat>
CHANGES IN VERSION 1.27.0
-------------------------
o New Bioc devel version
CHANGES IN VERSION 1.25.1
-------------------------
o add bin, compareChromatograms and compareSpectra
CHANGES IN VERSION 1.25.0
-------------------------
o Bioc devel (3.14) version bump
CHANGES IN VERSION 1.23.9
-------------------------
o Added new uniqueMsLevel generic <2021-04-08 Thu>
CHANGES IN VERSION 1.23.8
-------------------------
o Added new filterPrecursorCharge generic <2021-04-06 Tue>
CHANGES IN VERSION 1.23.7
-------------------------
o Add ProcessingStep object and related methods (moved from Spectra)
CHANGES IN VERSION 1.23.6
-------------------------
o Added quantify generics (moved from MSnbase) <2021-01-02 Sat>
CHANGES IN VERSION 1.23.5
-------------------------
o new alignRt generic.
CHANGES IN VERSION 1.23.4
-------------------------
o new virtual Param class.
CHANGES IN VERSION 1.23.3
-------------------------
o new filterIntensity generic.
CHANGES IN VERSION 1.23.2
-------------------------
o new compounds generic.
CHANGES IN VERSION 1.23.1
-------------------------
o new calculateFragments generic (moved from MSnbase)
CHANGES IN VERSION 1.19.3
-------------------------
o new impute generic
CHANGES IN VERSION 1.19.2
-------------------------
o new filterNA generic
CHANGES IN VERSION 1.19.1
-------------------------
o new aggregateFeatures generic
CHANGES IN VERSION 1.17.4
-------------------------
o New generics needed in Spectra and Chromatograms packages <2019-08-20 Tue>
CHANGES IN VERSION 1.17.3
-------------------------
o New tolerance generic <2019-08-16 Fri>
CHANGES IN VERSION 1.17.2
-------------------------
o New generics (see issue #8) <2019-05-12 Sun>
CHANGES IN VERSION 1.17.1
-------------------------
o Move many generics from MSnbase <2019-05-11 Sat>
CHANGES IN VERSION 1.9.1
------------------------
o add writeMSData <2017-09-20 Wed>
CHANGES IN VERSION 1.5.1
------------------------
o added isCentroided generic <2016-07-23 Sat>
CHANGES IN VERSION 1.5.0
------------------------
o Version bump Bioc devel
CHANGES IN VERSION 1.4.0
------------------------
o Version bump Bioc 3.3
CHANGES IN VERSION 1.3.3
------------------------
o exporting mz<- generic <2015-10-19 Mon>
CHANGES IN VERSION 1.3.2
------------------------
o Not depending on BiocGenerics <2015-10-16 Fri>
CHANGES IN VERSION 1.3.1
------------------------
o added chomatogram generic (previously defined in MSnbase)
<2015-10-15 Thu>
CHANGES IN VERSION 1.3.0
------------------------
o Bioc release 3.3
CHANGES IN VERSION 1.2.0
------------------------
o Bioc release 3.2
CHANGES IN VERSION 1.1.1
------------------------
o new mz<- generic function <2015-10-01 Thu>
CHANGES IN VERSION 1.1.0
------------------------
o Bioc devel version 3.2
CHANGES IN VERSION 1.0.0
------------------------
o Bioc release version 3.1
CHANGES IN VERSION 0.99.3
-------------------------
o update man with when and why ProtGenerics [2015-03-16 Mon]
CHANGES IN VERSION 0.99.2
-------------------------
o updating DESCRIPTION as with BiocContributions::clean
[2015-03-03 Tue]
CHANGES IN VERSION 0.99.1
-------------------------
o Adding NEWS file [2015-02-27 Fri]
CHANGES IN VERSION 0.99.0
-------------------------
o adding ProtGenerics to Manifest