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Add feature to fetch UCSC IDs #18

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Joaodemeirelles opened this issue Jun 10, 2022 · 0 comments
Open

Add feature to fetch UCSC IDs #18

Joaodemeirelles opened this issue Jun 10, 2022 · 0 comments
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enhancement New feature or request

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@Joaodemeirelles
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The idea would to create a feature similar to gget search for Ensembl but also for UCSC IDs.

I remember the last time I had to do something similar, in the end I had to do a request to the path below where "{ucsc_id}" would be the ID itself:
"https://genome-euro.ucsc.edu/cgi-bin/hgGene?hgg_gene={ucsc_id}&db=hg19"

Links that should help:
https://genome.ucsc.edu/goldenPath/help/api.html
https://www.biotools.fr/human/ucsc_id_converter

@lauraluebbert lauraluebbert added the enhancement New feature or request label Jun 13, 2022
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