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Bring back GTF attributes parser? #141
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any thoughts on which option would be best cc @nvictus @agalitsyna ? It seemed like there was quite the extensive discussion in #123. @smitkadvani was interested in implementing whichever solution made the most sense as it might clean up some code in one of his ongoing projects |
for what it's worth I have not had any issues with gtfparse on neither GENCODE or ENSEMBL. So we could just have a wrapper around gtfparse.read_gtf, and rename the |
Options:
parse_gtf_attributes
as read_gtf() with an option to parseThe text was updated successfully, but these errors were encountered: