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duplicate reads #12

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colsen opened this issue Oct 22, 2019 · 1 comment

colsen commented Oct 22, 2019

Hi,

I am wondering how you deal with duplicate reads? Are they discarded anywhere in the pipeline?

Thanks for your help,
Cat

Owner

nghiavtr commented Oct 25, 2019

Hi Cat,

FuSeq does not discard the duplicate reads. They are all taken into account in the downstream statistical tests.

Best,
Nghia

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