pyproject.toml

[tool.poetry]
name = "koza"
version = "0.0.0"
description = "Data transformation framework for LinkML data models"
authors = [
    "The Monarch Initiative <info@monarchinitiative.org>",
    "Kevin Schaper <kevinschaper@gmail.com>",
    "Glass Elsarboukh <g.elsarboukh@gmail.com>",
    "Kent Shefchek <kent@tislab.org>",
    ]
readme = "README.md"
license = "BSD License"
packages = [
    { include = "koza", from = "src"}
]

[tool.poetry.dependencies]
python = "^3.9"
duckdb = "*"
linkml = ">=1.7.8"
loguru = "*"
ordered-set = ">=4.1.0"
pydantic = "^2.4"
pyyaml = ">=5.0.0"
requests = "^2.24.0"
sssom = ">=0.4"
typer = ">=0.12.3"

[tool.poetry.dev-dependencies]
black = "^24.4"
ruff = "*"
pytest = ">=6.0.0"
biolink-model = ">=4.2"
dask = ">=2022.5.2"
mkdocs = ">=1.4"
mkdocs-material = ">=9.5"
mkdocstrings = {extras = ["python"], version = ">=0.22.0"}

[tool.poetry.scripts]
koza = "koza.main:typer_app"

[build-system]
requires = ["poetry-core", "poetry-dynamic-versioning"]
build-backend = "poetry_dynamic_versioning.backend"

[tool.black]
line-length = 120
skip-string-normalization = true

[tool.ruff]
line-length = 120
lint.ignore = [
    "F541", # f-strings with no placeholders
]