From b7aed05f8a65bdd6ddb830feb2f8b97591d7c258 Mon Sep 17 00:00:00 2001 From: Chris Mungall Date: Mon, 17 Jun 2024 15:00:14 -0700 Subject: [PATCH] deploy docs pipeline v2 --- .github/workflows/deploy-docs.yaml | 3 ++- README.md | 4 ++++ 2 files changed, 6 insertions(+), 1 deletion(-) diff --git a/.github/workflows/deploy-docs.yaml b/.github/workflows/deploy-docs.yaml index 4e5cf9b..1973e06 100644 --- a/.github/workflows/deploy-docs.yaml +++ b/.github/workflows/deploy-docs.yaml @@ -37,5 +37,6 @@ jobs: mkdir -p docs/kb touch docs/.nojekyll make gendoc - ([ ! -f docs/about.md ] && cp src/docs/about.md docs/ && cp derived/*.html docs/kb ) || true + ([ ! -f docs/about.md ] && cp src/docs/about.md docs/ ) || true + cp derived/*.html docs/kb make mkd-gh-deploy diff --git a/README.md b/README.md index 9d74df8..68f4add 100644 --- a/README.md +++ b/README.md @@ -54,6 +54,10 @@ less need for manual tweaking, RAG will be good enough. Also recall we can enhance in future steps +NOTE: This step does not use the pubmed directly. We are relying on the fact that the LLM has already ingested +and compressed all the literature and can do a pretty good first-pass job at re-exporting that in any +format we like. It doesn't have to be perfect though, subsequent steps are designed to refine this. + ### Adding evidence `make tmp/with-evidence.yaml`