pullapprove_template.yml

cat <<EOF >.pullapprove.yml
---
version: 3

  ${EDIT_INSTRUCTIONS}


pullapprove_conditions:
  - condition: "'WIP' not in title"
    unmet_status: pending
    explanation: "Work in progress"
  - condition: "'WIP' not in labels"
    unmet_status: pending
    explanation: "Work in progress"
  - condition: "'do not merge' not in labels"
    unmet_status: failure
    explanation: "Do Not Merge"


groups:
  # Reviews from 2 developers are required for any PR
  developers:
    reviews:
      required: 2
      request: 0  # number of review requests sent at a time
    reviewers:
      teams:
        - dsde-pipelines-developers

  # Reviews from scientific owners:
  # - will not be required if the 'eng-only' label is applied

  scientific_owners_arrays:
    conditions:
      - "'eng-only' not in labels"
      - "base.ref != 'master'"
      - "base.ref != 'staging'"
      - >
        ${ARRAYS_FILES}
    reviews:
      required: 1
      author_value: 1
      request: 1
      request_order: given
    reviewers:
      users:
        - gbggrant # George Grant

  scientific_owners_gdc_pipeline:
    conditions:
      - "'eng-only' not in labels"
      - "base.ref != 'master'"
      - "base.ref != 'staging'"
      - >
        ${GDC_WGS_FILES}
    reviews:
      required: 1
      author_value: 1
      request: 1
      request_order: given
    reviewers:
      users:
        - chipstewart # Chip Stewart

  scientific_owners_cram_to_unmapped_bam:
    conditions:
      - "'eng-only' not in labels"
      - "base.ref != 'master'"
      - "base.ref != 'staging'"
      - >
        ${CRAM_TO_UNMAPPED_BAMS}
    reviews:
      required: 1
      author_value: 1
      request: 1
      request_order: given
    reviewers:
      users:
        - kachulis # Chris Kachulis

  scientific_owners_germline_single_sample:
    conditions:
      - "'eng-only' not in labels"
      - "base.ref != 'master'"
      - "base.ref != 'staging'"
      - >
        ${GERMLINE_SINGLE_SAMPLE_FILES}
    reviews:
      required: 1
      author_value: 1
      request: 2
    reviewers:
      users:
        - samuelklee # Samuel Lee
        - kachulis # Chris Kachulis

  scientific_owners_joint_genotyping:
    conditions:
      - "'eng-only' not in labels"
      - "base.ref != 'master'"
      - "base.ref != 'staging'"
      - >
        ${JOINT_GENOTYPING_FILES}
    reviews:
      required: 1
      author_value: 1
      request: 1
      request_order: given
    reviewers:
      users:
        - samuelklee # Samuel Lee

  scientific_owners_somatic_single_sample:
    conditions:
      - "'eng-only' not in labels"
      - "base.ref != 'master'"
      - "base.ref != 'staging'"
      - >
        ${SOMATIC_SINGLE_SAMPLE_FILES}
    reviews:
      required: 1
      author_value: 1
      request: 1
      request_order: given
    reviewers:
      users:
        - fleharty # Mark Fleharty

  scientific_owners_imputation:
    conditions:
      - "'eng-only' not in labels"
      - "base.ref != 'master'"
      - "base.ref != 'staging'"
      - >
        ${IMPUTATION_FILES}
    reviews:
      required: 1
      author_value: 1
      request: 1
      request_order: given
    reviewers:
      users:
        - kachulis # Chris Kachulis


  # Clinical reviews:
  # - Approval is not required, this is just to send an email to Betty
  #   to make sure that she is aware of changes to the clinical pipelines
  clinical_owners:
    conditions:
      - "base.ref != 'master'"
      - "base.ref != 'staging'"
      - >
        ${CLINICAL_FILES}
    reviews:
      required: 0
      request: 1
    reviewers:
      users:
        - bwoolf2 # Betty Woolf