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cythexts.py
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cythexts.py
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import os
from os.path import splitext, sep as filesep, join as pjoin, relpath
from hashlib import sha1
from subprocess import check_call
from distutils.command.build_ext import build_ext
from distutils.command.sdist import sdist
from distutils.version import LooseVersion
def derror_maker(klass, msg):
""" Decorate distutils class to make run method raise error """
class K(klass):
def run(self):
raise RuntimeError(msg)
return K
def stamped_pyx_ok(exts, hash_stamp_fname):
""" Check for match of recorded hashes for pyx, corresponding c files
Parameters
----------
exts : sequence of ``Extension``
distutils ``Extension`` instances, in fact only need to contain a
``sources`` sequence field.
hash_stamp_fname : str
filename of text file containing hash stamps
Returns
-------
tf : bool
True if there is a corresponding c file for each pyx or py file in
`exts` sources, and the hash for both the (pyx, py) file *and* the c
file match those recorded in the file named in `hash_stamp_fname`.
"""
# Calculate hashes for pyx and c files. Check for presence of c files.
stamps = {}
for mod in exts:
for source in mod.sources:
base, ext = splitext(source)
if not ext in ('.pyx', '.py'):
continue
source_hash = sha1(open(source, 'rb').read()).hexdigest()
c_fname = base + '.c'
try:
c_file = open(c_fname, 'rb')
except IOError:
return False
c_hash = sha1(c_file.read()).hexdigest()
stamps[source_hash] = source
stamps[c_hash] = c_fname
# Read stamps from hash_stamp_fname; check in stamps dictionary
try:
stamp_file = open(hash_stamp_fname, 'rt')
except IOError:
return False
for line in stamp_file:
if line.startswith('#'):
continue
fname, hash = [e.strip() for e in line.split(',')]
if not hash in stamps:
return False
# Compare path made canonical for \/
fname = fname.replace(filesep, '/')
if not stamps[hash].replace(filesep, '/') == fname:
return False
stamps.pop(hash)
# All good if we found all hashes we need
return len(stamps) == 0
def cyproc_exts(exts, cython_min_version,
hash_stamps_fname = 'pyx-stamps',
build_ext=build_ext):
""" Process sequence of `exts` to check if we need Cython. Return builder
Parameters
----------
exts : sequence of distutils ``Extension``
If we already have good c files for any pyx or py sources, we replace
the pyx or py files with their compiled up c versions inplace.
cython_min_version : str
Minimum cython version neede for compile
hash_stamps_fname : str, optional
filename with hashes for pyx/py and c files known to be in sync. Default
is 'pyx-stamps'
build_ext : distutils command
default build_ext to return if not cythonizing. Default is distutils
``build_ext`` class
Returns
-------
builder : ``distutils`` ``build_ext`` class or similar
Can be ``build_ext`` input (if we have good c files) or cython
``build_ext`` if we have a good cython, or a class raising an informative
error on ``run()``
"""
if stamped_pyx_ok(exts, hash_stamps_fname):
# Replace pyx with c files, use standard builder
for mod in exts:
sources = []
for source in mod.sources:
base, ext = splitext(source)
if ext in ('.pyx', '.py'):
sources.append(base + '.c')
else:
sources.append(source)
mod.sources = sources
return build_ext
# We need cython
try:
from Cython.Compiler.Version import version as cyversion
except ImportError:
cython_ok = False
else:
cython_ok = LooseVersion(cyversion) >= cython_min_version
if cython_ok:
from Cython.Distutils import build_ext as extbuilder
return extbuilder
return derror_maker(build_ext,
'Need cython>=%s to build extensions'
% cython_min_version)
def build_stamp(pyxes):
""" Cythonize files in `pyxes`, return pyx, C filenames, hashes
Parameters
----------
pyxes : sequence
sequence of filenames of files on which to run Cython
Returns
-------
pyx_defs : dict
dict has key, value pairs of <pyx_filename>, <pyx_info>, where
<pyx_info> is a dict with key, value pairs of "pyx_hash", <pyx file SHA1
hash>; "c_filename", <c filemane>; "c_hash", <c file SHA1 hash>.
"""
pyx_defs = {}
for source in pyxes:
base, ext = splitext(source)
pyx_hash = sha1(open(source, 'rt').read()).hexdigest()
c_filename = base + '.c'
check_call('cython ' + source, shell=True)
c_hash = sha1(open(c_filename, 'rt').read()).hexdigest()
pyx_defs[source] = dict(pyx_hash=pyx_hash,
c_filename=c_filename,
c_hash=c_hash)
return pyx_defs
def write_stamps(pyx_defs, stamp_fname='pyx-stamps'):
""" Write stamp information in `pyx_defs` to filename `stamp_fname`
Parameters
----------
pyx_defs : dict
dict has key, value pairs of <pyx_filename>, <pyx_info>, where
<pyx_info> is a dict with key, value pairs of "pyx_hash", <pyx file SHA1
hash>; "c_filename", <c filemane>; "c_hash", <c file SHA1 hash>.
stamp_fname : str
filename to which to write stamp information
"""
with open(stamp_fname, 'wt') as stamp_file:
stamp_file.write('# SHA1 hashes for pyx files and generated c files\n')
stamp_file.write('# Auto-generated file, do not edit\n')
for pyx_fname, pyx_info in pyx_defs.items():
stamp_file.write('%s, %s\n' % (pyx_fname,
pyx_info['pyx_hash']))
stamp_file.write('%s, %s\n' % (pyx_info['c_filename'],
pyx_info['c_hash']))
def find_pyx(root_dir=None):
""" Recursively find files with extension '.pyx' starting at `root_dir`
Parameters
----------
root_dir : None or str, optional
Directory from which to search for pyx files. If None, use current
working directory.
Returns
-------
pyxes : list
list of filenames relative to `root_dir`
"""
if root_dir is None:
root_dir = os.getcwd()
pyxes = []
for dirpath, dirnames, filenames in os.walk(root_dir):
for filename in filenames:
if not filename.endswith('.pyx'):
continue
base = relpath(dirpath, root_dir)
pyxes.append(pjoin(base, filename))
return pyxes
def get_pyx_sdist(sdist_like=sdist, hash_stamps_fname='pyx-stamps'):
""" Add pyx->c conversion, hash recording to sdist command `sdist_like`
Parameters
----------
sdist_like : sdist command class, optional
command that will do work of ``distutils.command.sdist.sdist``. By
default we use the distutils version
hash_stamps_fname : str, optional
filename to which to write hashes of pyx / py and c files. Default is
``pyx-stamps``
Returns
-------
modified_sdist : sdist-like command class
decorated `sdist_like` class, for compiling pyx / py files to c, putting
the .c files in the the source archive, and writing hashes for these
into the file named from `hash_stamps_fname`
"""
class PyxSDist(sdist_like):
""" Custom distutils sdist command to generate .c files from pyx files.
Running the command object ``obj.run()`` will compile the pyx / py files
in any extensions, into c files, and add them to the list of files to
put into the source archive, as well as the usual behavior of distutils
``sdist``. It will also take the sha1 hashes of the pyx / py and c
files, and store them in a file ``pyx-stamps``, and put this file in the
release tree. This allows someone who has the archive to know that the
pyx and c files that they have are the ones packed into the archive, and
therefore they may not need Cython at install time. See
``cython_process_exts`` for the build-time command.
"""
def make_distribution(self):
""" Compile pyx to c files, add to sources, stamp sha1s """
pyxes = []
for mod in self.distribution.ext_modules:
for source in mod.sources:
base, ext = splitext(source)
if ext in ('.pyx', '.py'):
pyxes.append(source)
self.pyx_defs = build_stamp(pyxes)
for pyx_fname, pyx_info in self.pyx_defs.items():
self.filelist.append(pyx_info['c_filename'])
sdist_like.make_distribution(self)
def make_release_tree(self, base_dir, files):
""" Put pyx stamps file into release tree """
sdist_like.make_release_tree(self, base_dir, files)
stamp_fname = pjoin(base_dir, hash_stamps_fname)
write_stamps(self.pyx_defs, stamp_fname)
return PyxSDist
def build_stamp_source(root_dir=None, stamp_fname='pyx-stamps'):
""" Build cython c files, make stamp file in source tree `root_dir`
Parameters
----------
root_dir : None or str, optional
Directory from which to find ``.pyx`` files. If None, use current
working directory.
stamp_fname : str, optional
Filename for stamp file we will write
"""
pyxes = find_pyx(root_dir)
pyx_defs = build_stamp(pyxes)
write_stamps(pyx_defs, stamp_fname)