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How to best share output with collaborators? #27
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Hi there Guido, More than saving/sharing the shiny session, I would recommend you build up a GeneTonicList object, out of the components you might have passed singularly, and share that single object as an RDS file with your collaborators.
Then: if what you mean is to also keep track of the single elements you have been selecting live, and "showcase" them afterwards, that goes a little out of the scope of the simple loading of the RDS file. It is something that probably could be handled with shiny's bookmarking, but I was never too much into it to say I am confident it can really work... Some options might be added (should be fairly simple, but I just jinxed it by writing it here 😉 ) for reloading the bookmarked features - tagging @AnnekathrinSilvia to keep track of this potential feature. Hope this helps! Federico |
Hi,
I just saw your publication in BMC Bioinformatics on
GeneTonic
, and I would like to say thanks for developing such nice project!I am playing now with the sample files and code you provided, and everything is working nicely.
In the end I obviously would like to use it with my own data sets. I also analyze datasets for coworkers (that are not very familiar with R/Bioconductor etc). Therefore I was wondering what the best way is to share the interactive
GeneTonic
output with them. Ideally I would like to send them e.g. the HTML file (+ associated content) so they can interactively explore the results themselves on their own computer. So as a test I naively saved the 'Shiny session' in Firefox as HTML, and then opened it in Chrome, to find out that this is not working...So, do you have any suggestions on how to do this?
Please note that I don't know anything about Shiny apps.... so it might very well be that (hopefully!) I missed something obvious, or that what I want is rather not possible...
Thanks!
G
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