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DESCRIPTION
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DESCRIPTION
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Package: TOmicsVis
Type: Package
Title: Transcriptome Visualization Process Scheme
Version: 1.2.3
Authors@R: c(
person(given = "Benben", family = "Miao", email = "[email protected]",
role = c("aut", "cre"), comment = c(ORCID = "0000-0002-7307-1331")),
person(given = 'Wei', family = 'Dong', email = '[email protected]',
role = c("aut"), comment = c(ORCID = '0000-0003-2201-7164'))
)
Description: Transcriptome visualization from sample trait statistics to gene expression analysis. Six categories include "Samples Statistics", "Traits Analysis", "Differential Expression Analysis", "Advanced Analysis", "GO and KEGG Enrichment", "Tables Operations", with complete sample data.
URL: https://benben-miao.github.io/TOmicsVis/
BugReports: https://github.com/benben-miao/TOmicsVis/issues/
License: MIT + file LICENSE
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3
Encoding: UTF-8
LazyData: true
Depends:
R (>= 3.5),
Biobase (>= 2.5.5),
e1071 (>= 1.7-0)
Imports:
stats,
utils,
grid,
graphics,
grDevices,
ggplot2,
ggsci,
reshape2,
ggpubr,
ggcorrplot,
ggforce,
vegan,
venn,
circlize,
randomcoloR,
ComplexHeatmap,
EnhancedVolcano,
GGally,
survival,
survminer,
Rtsne,
dplyr,
tidyr,
clusterProfiler,
enrichplot,
ggnewscale,
igraph,
WGCNA,
stringr,
pheatmap,
RColorBrewer,
ggpolypath,
factoextra,
ggrepel,
cowplot,
ggplotify,
plotrix,
Mfuzz
Suggests:
knitr,
rmarkdown
VignetteBuilder: knitr