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Impact of Filtering Out Highly Expressing Cells #654

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seongguheo opened this issue Apr 17, 2024 · 0 comments
Open

Impact of Filtering Out Highly Expressing Cells #654

seongguheo opened this issue Apr 17, 2024 · 0 comments

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@seongguheo
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Dear Author,

I got a little different HMM prediction results whenever I applied different filtering threshold for the maximum read counts.
What impact does filtering out outlier cells which show extremely high read counts compare to the others bring to infercnv HMM prediction?

Thank you!

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