diff --git a/docker/Dockerfile b/docker/Dockerfile index 4d3efc9f..66657688 100644 --- a/docker/Dockerfile +++ b/docker/Dockerfile @@ -1,9 +1,8 @@ # Docker file for inferCNV FROM ubuntu:xenial - -RUN echo "deb http://cran.rstudio.com/bin/linux/ubuntu xenial/" | tee -a /etc/apt/sources.list && \ MAINTAINER ttickle@broadinstitute.org +RUN echo "deb http://cran.rstudio.com/bin/linux/ubuntu xenial/" | tee -a /etc/apt/sources.list && \ gpg --keyserver keyserver.ubuntu.com --recv-key E084DAB9 && \ gpg -a --export E084DAB9 | apt-key add - @@ -16,6 +15,8 @@ echo "library(\"devtools\")" >> install_devtools.r && \ echo "install_github(\"broadinstitute/inferCNV\")" >> install_devtools.r && \ R --no-save < install_devtools.r +RUN apt-get update && apt-get install -y python3 + RUN git clone https://github.com/broadinstitute/inferCNV.git ENV PATH=${PATH}:/inferCNV/scripts