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I am using checkpointFile in the runtime section of a WDL task.
I accidentally included a space in the checkpoint file name, and I see in the logs that this (probably) breaks checkpointing.
Log file shows
CHECKPOINTING: Making local copy of /cromwell_root/noise_prompting_classical monocyte_H_shard0.csv
cp: can't create 'monocyte_H_shard0.csv-tmp/noise_prompting_classical': No such file or directory
cp: can't create 'monocyte_H_shard0.csv-tmp/monocyte_H_shard0.csv': No such file or directory
cp: can't create 'monocyte_H_shard0.csv-tmp/noise_prompting_classical': No such file or directory
CHECKPOINTING: Uploading new checkpoint content
Running on GCP via Terra.
When I remove the space in the filename, I see this in the logs, which appears to be working fine:
CHECKPOINTING: Making local copy of /cromwell_root/noise_prompting_classical_monocyte_H_shard0.csv
CHECKPOINTING: Uploading new checkpoint content
The text was updated successfully, but these errors were encountered:
I am using
checkpointFile
in theruntime
section of a WDLtask
.I accidentally included a space in the checkpoint file name, and I see in the logs that this (probably) breaks checkpointing.
Log file shows
Running on GCP via Terra.
When I remove the space in the filename, I see this in the logs, which appears to be working fine:
The text was updated successfully, but these errors were encountered: