From 8d0abe3710601a8ae9b4a2bd1ae2d470328bd17a Mon Sep 17 00:00:00 2001
From: Martin <mproksik@gmail.com>
Date: Mon, 12 Jun 2023 08:56:54 +0200
Subject: [PATCH] fix: missing CUDA module

---
 docs/dangpu/alphafold2.md | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/docs/dangpu/alphafold2.md b/docs/dangpu/alphafold2.md
index 89ec11d..11ea609 100644
--- a/docs/dangpu/alphafold2.md
+++ b/docs/dangpu/alphafold2.md
@@ -14,7 +14,7 @@ MAAHKGAEHHHKAAEHHEQAAKHHHAAAEHHEKGEHEQAAHHADTAYAHHKHAEEHAAQAAKHDAEHHAPKPH
 
 ```bash
 srun -N 1 --ntasks-per-node=10 --gres=gpu:2 --pty bash
-module load miniconda/latest
+module load miniconda/latest cuda/11.4 cudnn/8.2.2
 source activate /maps/projects/dan1/data/Brickman/conda_envs/af2
 
 cd /maps/projects/dan1/data/Brickman/alphafold
@@ -75,7 +75,7 @@ python run_alphafold.py \
 #SBATCH --mail-type=BEGIN,END
 #SBATCH --mail-user=YOUR-EMAIL
 
-module load miniconda/latest
+module load miniconda/latest cuda/11.4 cudnn/8.2.2
 source activate af2
 cd ~/projects/data/Brickman/alphafold
 mkdir -p /scratch/tmp/alphatest