diff --git a/recipes/pacini_typing/meta.yaml b/recipes/pacini_typing/meta.yaml new file mode 100644 index 0000000000000..07b1ef0121072 --- /dev/null +++ b/recipes/pacini_typing/meta.yaml @@ -0,0 +1,51 @@ +{% set name = "pacini_typing" %} +{% set version = "1.6.1" %} + +package: + name: "{{ name }}" + version: "{{ version }}" + +source: + url: https://github.com/RIVM-bioinformatics/Pacini-typing/archive/refs/tags/v{{ version }}.tar.gz + sha256: f4bbd7daf83aa50e7de113ab55fb485eeba8e567fac6d48f5799e073a629d8b5 + +build: + number: 0 + noarch: python + script: + - {{ PYTHON }} -m pip install . --no-deps -vv + run_exports: + - {{ pin_subpackage("pacini_typing", max_pin="x") }} + +requirements: + host: + - python >=3.10,<=3.12 + - pip + run: + - python >=3.10,<=3.12 + - biopython + - pysam + - pyyaml + - networkx + - scipy + - numpy + - tqdm + - pandas + - blast + - kma + +test: + commands: + - pacini_typing --help + - Pacini-typing --help + +about: + home: "https://github.com/RIVM-bioinformatics/Pacini-typing" + license: AGPL-3.0 + license_file: LICENSE + summary: "YAML-based bacterial genotyping application" + dev_url: "https://github.com/RIVM-bioinformatics/Pacini-typing" + +extra: + recipe-maintainers: + - MarkStreek