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localcolab fold skipping other sequences in csv file? #222
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Hi @amoschoomy, I have the same issue, how did you fix it? Thanks! |
I just ran it without the zip parameter and resort to zipping the entire results folder once it is done |
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log.txt
my csv file
colabfold_batch /scratch/project/tcr_ml/colabfold/cancer/TRUST_TB-000025-D1WBLL-01_RNAseq_L001_R1_airr_extracted.tsv_cdr3.csv results --num-recycle 10 --use-gpu-relax --amber --zip --recompile-padding 0
this is the command i use to run localcolabfold.it runs the first amino acid sequence but once its complete it skips the remaining sequence, is it something with the zip command? i run it without the zip command and it processed all the sequence.
results
is a directory. Thanks.The text was updated successfully, but these errors were encountered: