From 90797b831881681da47132da65170c8bf6c6b2b5 Mon Sep 17 00:00:00 2001 From: statwangz <48282751+statwangz@users.noreply.github.com> Date: Tue, 19 Sep 2023 07:06:49 +0000 Subject: [PATCH] =?UTF-8?q?Deploying=20to=20gh-pages=20from=20@=20YangLabH?= =?UTF-8?q?KUST/mfair@4a5b74e9ce80985ffe3e062f3041172dc99b7cb6=20?= =?UTF-8?q?=F0=9F=9A=80?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- articles/ml100k.html | 6 ++++++ articles/neocortex.html | 2 ++ pkgdown.yml | 2 +- reference/createMFAIR.html | 13 ++++++++++++- search.json | 2 +- 5 files changed, 22 insertions(+), 3 deletions(-) diff --git a/articles/ml100k.html b/articles/ml100k.html index aa06bdc..6c493ac 100644 --- a/articles/ml100k.html +++ b/articles/ml100k.html @@ -111,6 +111,8 @@
# Create MFAIR object and use the same initialization
mfairObject_pmt <- createMFAIR(Y, X_pmt, K_max = 3)
+#> The main data matrix Y is partially observed!
+#> The main data matrix Y has been centered with mean = 3.52986!
mfairObject_pmt@initialization <- mfairObject@initialization
# Fit the MFAI model
@@ -266,6 +270,8 @@ Negative control
# Create MFAIR object and use the same initialization
mfairObject_both <- createMFAIR(Y, X_both, K_max = 3)
+#> The main data matrix Y is partially observed!
+#> The main data matrix Y has been centered with mean = 3.52986!
mfairObject_both@initialization <- mfairObject@initialization
# Fit the MFAI model
diff --git a/articles/neocortex.html b/articles/neocortex.html
index 53cc7ea..a4d24c6 100644
--- a/articles/neocortex.html
+++ b/articles/neocortex.html
@@ -125,6 +125,8 @@ Fitting the MFAI modelY <- neocortex$expression
X <- neocortex$sample_info[, c("Region", "Stage")]
mfairObject <- createMFAIR(Y, X, K_max = 3)
+#> The main data matrix Y is completely observed!
+#> The main data matrix Y has been centered with mean = 7.64309222668172!
# Fit the MFAI model
mfairObject <- fitGreedy(mfairObject,
diff --git a/pkgdown.yml b/pkgdown.yml
index 54f98f7..67517db 100644
--- a/pkgdown.yml
+++ b/pkgdown.yml
@@ -4,7 +4,7 @@ pkgdown_sha: ~
articles:
ml100k: ml100k.html
neocortex: neocortex.html
-last_built: 2023-09-16T07:18Z
+last_built: 2023-09-19T07:04Z
urls:
reference: https://yanglabhkust.github.io/mfair/reference
article: https://yanglabhkust.github.io/mfair/articles
diff --git a/reference/createMFAIR.html b/reference/createMFAIR.html
index 843b069..4c8f1c0 100644
--- a/reference/createMFAIR.html
+++ b/reference/createMFAIR.html
@@ -55,7 +55,14 @@