From c44ed2b034a6c8d4c9276838bbce350354060da6 Mon Sep 17 00:00:00 2001
From: WANG Gefei <46701885+gefeiwang@users.noreply.github.com>
Date: Sun, 25 Jun 2023 11:15:57 +0800
Subject: [PATCH] Update environment.yml

---
 environment.yml | 19 ++++++++++---------
 1 file changed, 10 insertions(+), 9 deletions(-)

diff --git a/environment.yml b/environment.yml
index 86bb401..875da27 100644
--- a/environment.yml
+++ b/environment.yml
@@ -1,18 +1,19 @@
 name: stitch3d
 channels:
   - conda-forge
+  - pytorch
   - bioconda
   - defaults
 dependencies:
-  - python=3.7.10
-  - pytorch=1.8.1
+  - python>=3.7
+  - pytorch>=1.6.0, <=1.13.1
   - scanpy=1.7.2
   - anndata=0.7.6
-  - numpy=1.19.2
-  - louvain=0.7.0
-  - leidenalg=0.7.0
   - pandas=1.1.5
-  - umap-learn=0.4.6
-  - numba=0.49.1
-  - pot=0.8.1.0
-  - h5py=3.1.0
\ No newline at end of file
+  - numpy>=1.19.0
+  - louvain=0.7.0
+  - leidenalg>=0.7.0
+  - umap-learn>=0.4.6
+  - pot>=0.8.0
+  - numba>=0.49.1
+  - matplotlib<3.7