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Errors when installing and running the PULpy #9

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J5886 opened this issue Jul 16, 2024 · 0 comments
Open

Errors when installing and running the PULpy #9

J5886 opened this issue Jul 16, 2024 · 0 comments

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@J5886
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J5886 commented Jul 16, 2024 •
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Hello,

I'm trying to install the PULpy, but got the following error
bash: hmmpress: command not found...
with
hmmpress Pfam-A.hmm for the step Get Pfam data and
hmmpress dbCAN-fam-HMMs.txt for the step Get DBCAN data

and when tried to run the tool with snakemake --use-conda
the following error was raised
bash: snakemake: command not found...

any suggestion?

Thank you
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@J5886