v3.9.0

v3.9.0 (2019-07-30)

Diff since v3.8.2

Closed issues:

• warnings for solve (#138)
• Symbolic calculations à la ParameterizedFunctions (#14)

Merged pull requests:

• Remove solve warning (#143) (ChrisRackauckas)
• Add ! after function names (#142) (TorkelE)
• Add citation for HomotopyContinuation (#140) (TorkelE)
• fix empty jump expr Tuple giving error (#139) (isaacsas)
• Add basic steady state/bifurcation (#136) (TorkelE)
• Make bifurcation diagram variants names more consistent. (#135) (TorkelE)
• • Remove some Int64 (#133) (TorkelE)
• Add CITATION.bib (#125) (asinghvi17)
• Equilibrate (#97) (TorkelE)

v3.8.2

v3.8.2 (2019-06-20)

Diff since v3.8.1

Merged pull requests:

• add explicit size for sparse matrices (#132) (isaacsas)
• replace species names in SymEngine with temp symbols (#131) (isaacsas)

v3.8.1

v3.8.1 (2019-06-14)

Diff since v3.8.0

Merged pull requests:

• add back Compat (#130) (isaacsas)
• add SparseArrays dependency (#128) (isaacsas)

v3.8.0

v3.8.0 (2019-06-13)

Diff since v3.7.2

Closed issues:

• Register (#127)
• Add keywords on Github (#121)
• addjumps! for large systems (#115)
• stoichiometric matrix as alternative input (#78)

Merged pull requests:

• add a project toml (#126) (ChrisRackauckas)
• drop giving jacobian function an explicit name (#124) (isaacsas)
• Sparse Jacobian support (#123) (isaacsas)
• [skip ci] reactivate codecov and update README (#122) (isaacsas)
• refactorings (#120) (isaacsas)
• Update readme (#119) (isaacsas)

test for network equality and new API accessor functions

Merge pull request #118 from isaacsas/export-new-API-funcs

export symstoich functions

faster incremental network construction

Merge pull request #116 from isaacsas/faster-recursive-content

further optimize addreaction! for large systems

incremental network construction

Merge pull request #113 from isaacsas/incremental-model-construction

Incremental model construction

more query functions and API documentation

Merge pull request #111 from isaacsas/doc-updates

Doc updates

more efficient generated ODE functions

Added @inbounds and cleaned extraneous operations.

fix small memory allocations

Merge pull request #99 from isaacsas/f-allocations-check

return nothing in ODE/SDE functions