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Description of the bug
It is unclear if there is any limit by default or it will consume as much as necessary. If there is, it should be explicitly stated. Command used and terminal outputNo response Relevant filesTroubleshooting section of User Guide. System informationNo response |
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Answered by
smlmbrt
Feb 28, 2024
Replies: 1 comment
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The defaults are set in the
I would just recommend setting these to whatever your containers allow (e.g. docker resource limits on a laptop), or for your compute cluster (see https://pgsc-calc.readthedocs.io/en/latest/troubleshooting.html#the-workflow-isn-t-using-many-resources-e-g-ram-cpu). |
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Answer selected by
smlmbrt
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The defaults are set in the
nextflow.config
file, and they currently are:I would just recommend setting these to whatever your containers allow (e.g. docker resource limits on a laptop), or for your compute cluster (see https://pgsc-calc.readthedocs.io/en/latest/troubleshooting.html#the-workflow-isn-t-using-many-resources-e-g-ram-cpu).