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Using MNN corrected data for diffusion map generation #25

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shokohirosue opened this issue Feb 6, 2021 · 2 comments

shokohirosue commented Feb 6, 2021

Hi Aaron,

Do you think it is appropriate to use MNN corrected data for diffusion map formation too?

Thank you for your help.

Owner

LTLA commented Feb 9, 2021

Sounds perfectly reasonable to me.

Author

shokohirosue commented Feb 9, 2021 •

edited

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Thank you! Do you have any recommendations? Tools I have tried so far seem to use normalised count or count data matrix.

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