install from source #421
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gcamdata doesn't install R packages on your computer. There is a list of packages that should be installed, using the |
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Thank you Page,
I installed the packages but was not very lucky because at one point in the
install process I have another error:
[
1] "module_energy_L202.Ccoef"
[1] "- make 0.01"
[1] "module_energy_L210.resources"
Error in `mutate()` at gcamdata/R/utils-data.R:32:3:
ℹ In argument: `environCost = if_else(resource == "coal" & region %in%
L210.low_reg, 0, environCost)`.
Caused by error in `if_else()`:
! `false` must be a vector, not `NULL`.
Backtrace:
▆
1. ├─gcamdata::driver(write_output = FALSE, write_xml = TRUE)
2. │ └─gcamdata:::run_chunk(chunk, all_data[input_names]) at
gcamdata/R/driver.R:364:7
3. │ ├─base::do.call(chunk, list(driver.MAKE, all_data)) at
gcamdata/R/driver.R:16:3
4. │ └─gcamdata:::module_energy_L210.resources("MAKE", `<named list>`)
5. │ └─... %>% ... at gcamdata/R/zenergy_L210.resources.R:537:5
6. ├─gcamdata:::add_precursors(...)
7. ├─gcamdata:::add_legacy_name(., "L210.RsrcEnvironCost_SSP4", overwrite
= TRUE) at gcamdata/R/utils-data.R:108:3
8. ├─gcamdata:::add_comments(., "EnvironCost adjusted for high growth and
low growth regions ") at gcamdata/R/utils-data.R:67:3
9. ├─gcamdata:::add_comments(., "A10.EnvironCost_SSPs written to all
regions") at gcamdata/R/utils-data.R:49:3
10. ├─gcamdata:::add_units(., "$/GJ") at gcamdata/R/utils-data.R:49:3
11. ├─gcamdata:::add_title(...) at gcamdata/R/utils-data.R:91:3
12. ├─dplyr::mutate(...) at gcamdata/R/utils-data.R:32:3
13. ├─dplyr:::mutate.data.frame(...)
14. │ └─dplyr:::mutate_cols(.data, dplyr_quosures(...), by)
15. │ ├─base::withCallingHandlers(...)
16. │ └─dplyr:::mutate_col(dots[[i]], data, mask, new_columns)
17. │ └─mask$eval_all_mutate(quo)
18. │ └─dplyr (local) eval()
19. ├─dplyr::if_else(resource == "coal" & region %in% L210.low_reg, 0,
environCost)
20. │ └─dplyr:::vec_case_when(...)
21. │ └─vctrs::list_check_all_vectors(values, arg = values_arg, call =
call)
22. └─vctrs:::stop_scalar_type(`<fn>`(NULL), "false", `<env>`)
23. └─vctrs:::stop_vctrs(...)
24. └─rlang::abort(message, class = c(class, "vctrs_error"), ..., call
= call)
Execution halted
make: *** [Makefile:5: xml] Error 1
…On Sun, Apr 28, 2024 at 7:27 AM Page Kyle ***@***.***> wrote:
gcamdata doesn't install R packages on your computer. There is a list of
packages that should be installed, using the install.packages() function
in R, in the file input/gcamdata/DESCRIPTION. The file isn't
automatically updated, and as such the version numbers indicated in that
file can be ignored. Still, every package listed in the "Imports" section
should be installed locally. Copying here in case it's helpful.
assertthat
dplyr
methods
magrittr
tibble
tidyr
readr
data.table
rlang
stringr
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Right, that's because we never followed up the GCAM7 release last summer with another release that fixes this issue. I think that code didn't crash in some older versions of dplyr, for some reason, because it worked when it was tested out! This exact error is shown here: #393 (comment) |
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There is an issue cloning the repository.
git remote add github_pkyle https://github.com/pkyle/gcam-core.git
fatal: not a git repository (or any parent up to mount point /media/sarr)
Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set).
…On Mon, Apr 29, 2024 at 3:50 PM Page Kyle ***@***.***> wrote:
Right, that's because we never followed up the GCAM7 release last summer
with another release that fixes this issue. I think that code didn't crash
in some older versions of dplyr, for some reason, because it worked when it
was tested out! This exact error is shown here: #393 (comment)
<#393 (comment)>
And my first reply is what I'd recommend doing here too: #393 (comment)
<#393 (comment)>
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Oh, that |
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Well, leave it there for now, waiting another release
…On Wed, May 1, 2024 at 7:16 PM Page Kyle ***@***.***> wrote:
Oh, that git remote ... command can only be executed from within a git
repo. So, your working directory should be gcam-core (or one of the
subdirectories). If you're working from a static release version, as
opposed to a locally cloned git repository, I'm not sure that there's any
simple/clean way to automatically apply (cherry-pick) these commits, but
they're pretty small, and can just be done manually. Here are the two that
you'll want:
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<pkyle@1d25fbc>
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I am attempting to install version7 on Ubuntu 22.04 but experiencing error message:
cd input/gcamdata && Rscript -e "devtools::load_all('.')" -e "driver(write_output=FALSE, write_xml=TRUE)"
ℹ Loading gcamdata
Error in load_imports(path) :
The package "assertthat" (>= 0.2) is required.
Calls: ... load_imports -> deps_check_installed -> check_installed
Execution halted
make: *** [Makefile:5: xml] Error 1
expect hint from some with experience installing from source.
Thank you
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