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NAMESPACE
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NAMESPACE
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# Generated by roxygen2: do not edit by hand
S3method(coef,susie)
S3method(predict,susie)
export(coef.susie)
export(compute_ss)
export(ctwas)
export(ctwas_rss)
export(harmonize_wgt_ld)
export(harmonize_z_ld)
export(impute_expr)
export(impute_expr_z)
export(predict.susie)
export(prep_exprvar)
export(prep_pgen)
export(prep_pvar)
export(read_expr)
export(read_exprvar)
export(read_pgen)
export(read_pvar)
export(susie)
export(susieI)
export(susieI_rss)
export(susie_get_cs)
export(susie_get_lfsr)
export(susie_get_niter)
export(susie_get_objective)
export(susie_get_pip)
export(susie_get_posterior_mean)
export(susie_get_posterior_samples)
export(susie_get_posterior_sd)
export(susie_get_prior_variance)
export(susie_get_residual_variance)
export(susie_init_coef)
export(susie_rss)
export(susie_suff_stat)
export(univariate_regression)
importFrom(Matrix,colMeans)
importFrom(Matrix,colSums)
importFrom(Matrix,crossprod)
importFrom(Matrix,diag)
importFrom(Matrix,rowSums)
importFrom(Matrix,t)
importFrom(Matrix,tcrossprod)
importFrom(foreach,"%dopar%")
importFrom(foreach,foreach)
importFrom(logging,addHandler)
importFrom(logging,loginfo)
importFrom(methods,as)
importFrom(pgenlibr,GetVariantCt)
importFrom(pgenlibr,NewPgen)
importFrom(pgenlibr,NewPvar)
importFrom(pgenlibr,ReadList)
importFrom(stats,.lm.fit)
importFrom(stats,coef)
importFrom(stats,cor)
importFrom(stats,cov2cor)
importFrom(stats,dnorm)
importFrom(stats,lm)
importFrom(stats,median)
importFrom(stats,optim)
importFrom(stats,optimize)
importFrom(stats,pnorm)
importFrom(stats,rmultinom)
importFrom(stats,rnorm)
importFrom(stats,summary.lm)
importFrom(stats,uniroot)
importFrom(stats,var)
importFrom(tools,file_ext)
importFrom(tools,file_path_sans_ext)
importFrom(utils,modifyList)