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support for bgzipped and tabix-indexed map files #120

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aryarm opened this issue Oct 13, 2022 · 1 comment
Open

support for bgzipped and tabix-indexed map files #120

aryarm opened this issue Oct 13, 2022 · 1 comment
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enhancement New feature or request

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@aryarm
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aryarm commented Oct 13, 2022 •
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my impression is that reading map files is already really fast, but this could be one option to make it faster (especially when running on it on specific regions) and reduce the amount of space required on disk

unfortunately, map files are currently space-delimited, so we would have to somehow add support for tab-delimited map files since tabix only supports tab-delimited files (I think)
@aryarm aryarm added the enhancement New feature or request label Oct 13, 2022
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aryarm commented Oct 13, 2022

we can also add support for indexing them via the index subcommand

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